Home Subjects Biochemistry

Biochemistry

Metabolic pathways, enzymes, proteins

72 Q 3 Topics Take Test
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Difficulty: All Easy Medium Hard 51–60 of 72
Topics in Biochemistry
All Proteins & Enzymes 100 Carbohydrates 100 Lipids 78
Which of the following amino acids is classified as nonpolar and hydrophobic?
A Leucine
B Serine
C Aspartate
D Threonine
Correct Answer:  A. Leucine
EXPLANATION

Leucine is a nonpolar, hydrophobic amino acid with an isobutyl side chain. Serine and threonine are polar uncharged, while aspartate is acidic and polar.

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Which statement correctly describes protein denaturation?
A Denaturation always involves breaking of peptide bonds
B Denaturation disrupts secondary, tertiary, and quaternary structures but leaves primary structure intact
C All denatured proteins are irreversibly inactivated
D Denaturation requires enzymatic activity
Correct Answer:  B. Denaturation disrupts secondary, tertiary, and quaternary structures but leaves primary structure intact
EXPLANATION

Denaturation is disruption of non-covalent interactions (hydrogen bonds, hydrophobic interactions, ionic bonds) that maintain higher-order structures. Peptide bonds (primary structure) remain intact. Some proteins can refold (renature) if conditions permit, as demonstrated by Anfinsen's ribonuclease experiments.

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What is the isoelectric point (pI) of a protein?
A pH at which protein has maximum solubility
B pH at which protein has zero net charge
C pH at which protein denatures
D pH at which enzyme shows maximum activity
Correct Answer:  B. pH at which protein has zero net charge
EXPLANATION

The isoelectric point is the pH at which the net charge on the protein is zero, resulting in minimum solubility and maximum precipitation.

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Which enzyme catalyzes the hydrolysis of proteins into smaller polypeptides and amino acids?
A Amylase
B Protease
C Lipase
D Nuclease
Correct Answer:  B. Protease
EXPLANATION

Proteases are endopeptidases and exopeptidases that hydrolyze peptide bonds in proteins. Amylase acts on carbohydrates, lipase on fats, and nuclease on nucleic acids.

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What is the quaternary structure of hemoglobin?
A A single polypeptide chain
B Two α and two β subunits
C Four identical subunits
D Random coil arrangement
Correct Answer:  B. Two α and two β subunits
EXPLANATION

Hemoglobin has quaternary structure consisting of 2 α-globin and 2 β-globin subunits held together by non-covalent interactions.

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Which of the following amino acids contains a nonpolar, hydrophobic side chain?
A Leucine
B Serine
C Asparagine
D Lysine
Correct Answer:  A. Leucine
EXPLANATION

Leucine has a nonpolar, hydrophobic isopropyl side chain. Serine and asparagine are polar, while lysine is positively charged.

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Which type of enzymatic reaction does DNA ligase catalyze, and what cofactor is required?
A Hydrolysis of RNA; requires Mg2+ only
B Formation of phosphodiester bonds; requires NAD+ or ATP
C Unwinding of double-stranded DNA; requires GTP
D Methylation of cytosine; requires SAM
Correct Answer:  B. Formation of phosphodiester bonds; requires NAD+ or ATP
EXPLANATION

DNA ligase catalyzes the formation of phosphodiester bonds between adjacent DNA strands. In prokaryotes, it uses NAD+ as the energy source, while in eukaryotes, ATP is used. This is essential for DNA replication, repair, and recombination.

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Which enzyme catalyzes the formation of peptide bonds during protein synthesis on the ribosome?
A Aminoacyl-tRNA synthetase
B Peptidyl transferase (part of the 23S/28S rRNA)
C EF-Tu
D Protease
Correct Answer:  B. Peptidyl transferase (part of the 23S/28S rRNA)
EXPLANATION

Peptidyl transferase activity is catalyzed by the 23S rRNA (in prokaryotes) or 28S rRNA (in eukaryotes) component of the ribosome. This ribozyme catalyzes the formation of the peptide bond between the incoming aminoacyl-tRNA and the growing polypeptide chain.

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In the context of enzyme kinetics, what does the turnover number (kcat) represent?
A The number of substrate molecules converted to product per unit time under saturating conditions
B The substrate concentration at half-maximum velocity
C The number of substrate molecules an enzyme can bind per second
D The rate constant for enzyme-substrate complex formation
Correct Answer:  A. The number of substrate molecules converted to product per unit time under saturating conditions
EXPLANATION

Turnover number (kcat = Vmax/[E]total) represents the number of substrate molecules converted to product per enzyme molecule per unit time at maximum velocity. It indicates catalytic efficiency when substrate is saturating.

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Which of the following proteases is secreted as an inactive zymogen and requires trypsin for its activation?
A Elastase
B Chymotrypsin
C Pepsin
D Caspase-3
Correct Answer:  B. Chymotrypsin
EXPLANATION

Chymotrypsin is secreted as chymotrypsinogen. Trypsin (activated by enterokinase) cleaves a specific dipeptide from chymotrypsinogen to generate active chymotrypsin, which then undergoes autolytic cleavage for full activation.

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