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Biotechnology

Genetic engineering, fermentation, cell biology

130 Q 3 Topics Take Mock Test
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Difficulty: All Easy Medium Hard 41–50 of 130
Topics in Biotechnology
In real-time PCR (qPCR), which fluorescent dye binds to double-stranded DNA and is commonly used for target quantification?
A SYBR Green
B Acridine orange
C Ethidium bromide
D Methylene blue
Correct Answer:  A. SYBR Green
EXPLANATION

SYBR Green intercalates into double-stranded DNA and exhibits enhanced fluorescence, making it ideal for real-time monitoring of PCR amplification.

Test
Which of the following statements about primer design for PCR is INCORRECT?
A Primers should be 18-25 bp long
B GC content should be 40-60%
C Primers should have high self-complementarity to ensure specificity
D Tm (melting temperature) of both primers should be similar
Correct Answer:  C. Primers should have high self-complementarity to ensure specificity
EXPLANATION

High self-complementarity and primer-dimer formation should be avoided as they reduce PCR efficiency and specificity. Primers should have minimal secondary structure.

Test
In whole genome amplification (WGA) using multiple displacement amplification (MDA), which enzyme is used?
A Taq polymerase
B Phi29 DNA polymerase
C Reverse transcriptase
D T4 DNA polymerase
Correct Answer:  B. Phi29 DNA polymerase
EXPLANATION

Phi29 polymerase, from bacteriophage Phi29, has high processivity and 3' to 5' exonuclease activity, making it ideal for isothermal multiple displacement amplification of entire genomes.

Test
What is the primary advantage of using nested PCR in pathogen detection?
A It reduces the number of PCR cycles required
B It increases specificity and sensitivity by using two rounds of amplification with inner and outer primer sets
C It eliminates primer-dimer formation
D It requires only one set of primers
Correct Answer:  B. It increases specificity and sensitivity by using two rounds of amplification with inner and outer primer sets
EXPLANATION

Nested PCR uses outer primers for the first amplification round and inner primers for the second round, significantly improving specificity and sensitivity for detecting low-copy pathogens.

Test
In the diagnosis of genetic disorders, why is allele-specific PCR (AS-PCR) preferred for detecting known mutations?
A It is faster than conventional sequencing
B It can specifically amplify the mutant allele while discriminating against the wild-type allele
C It requires no thermal cycling
D It eliminates the need for gel electrophoresis
Correct Answer:  B. It can specifically amplify the mutant allele while discriminating against the wild-type allele
EXPLANATION

AS-PCR uses primers with mismatches at the 3' end that only allow amplification when perfectly matched to the target allele, providing rapid and cost-effective mutation detection.

Test
What is the primary limitation of PCR when amplifying GC-rich sequences?
A Primers cannot bind to GC-rich regions
B Secondary structures form, reducing amplification efficiency
C Taq polymerase becomes inactive
D dNTPs are consumed too quickly
Correct Answer:  B. Secondary structures form, reducing amplification efficiency
EXPLANATION

GC-rich sequences tend to form stable secondary structures (hairpins, loops), which can inhibit primer annealing and polymerase extension, reducing PCR efficiency.

Test
In forensic applications, why are microsatellites (STRs) preferred over SNPs for individual identification?
A They are easier to sequence
B They show high polymorphism and can uniquely identify individuals
C They are located only on the Y chromosome
D They do not require PCR amplification
Correct Answer:  B. They show high polymorphism and can uniquely identify individuals
EXPLANATION

STRs (Short Tandem Repeats) exhibit high variability between individuals due to differences in repeat numbers, making them ideal for forensic DNA profiling and paternity testing.

Test
AFLP (Amplified Fragment Length Polymorphism) technology combines which two DNA techniques?
A PCR and DNA sequencing
B PCR and restriction enzyme digestion
C DNA hybridization and gel electrophoresis
D Cloning and Southern blotting
Correct Answer:  B. PCR and restriction enzyme digestion
EXPLANATION

AFLP combines restriction enzyme digestion with PCR amplification of specific DNA fragments, generating polymorphic banding patterns useful for genetic mapping and strain differentiation.

Test
What is the primary advantage of digital PCR (dPCR) over conventional qPCR?
A It requires fewer cycles
B It partitions samples into thousands of independent reactions for absolute quantification
C It eliminates the need for thermal cycling
D It uses lower annealing temperatures
Correct Answer:  B. It partitions samples into thousands of independent reactions for absolute quantification
EXPLANATION

dPCR partitions the PCR reaction into numerous isolated compartments, allowing absolute quantification without requiring a standard curve, and provides higher precision than qPCR.

Test
In reverse transcription PCR (RT-PCR), which enzyme is critical for the first step?
A Taq polymerase
B Reverse transcriptase
C DNA ligase
D Helicase
Correct Answer:  B. Reverse transcriptase
EXPLANATION

Reverse transcriptase synthesizes complementary DNA (cDNA) from an RNA template in the first step of RT-PCR, enabling amplification of RNA targets like mRNA.

Test
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